miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|212652465|gb|DK577871.1|DK577871 CTTTCTTTGCGGAATCACCATGGCGGCTGGGACCCTGTATACGTATCCTGAAAACTGGAGGGCCTTCAAGGCTCTCATCG
CTGCACAATACAGCGGGGCTCAGGTCCGCGTGCTCTCCGCACCACCCCACTTCCATTTTGGCCAAACCAACCGCACCCCT
GAATTTCTCCGCAAATTTCCTGCCGGCAAGGTTCCAGCATTTGAGGGTGACGATGGATTCTGTGTGTTTGAGAGCAACGC
CATTGCCTACTATGTGAGCAATGAGGAGCTGCGGGGAAGTACTCCAGAGGCAGCAGCCCAGGTGGTGCAGTGGGTGAGCT
TTGCTGATTCCGACATAGTGCCCCCAGCCAGTACCTGGGTATTCCCCACCTTGGGCATCATGCACCACAACAAACAGGCC
ACTGAGAATGCAAAGGAGGAAGTGAGGCGAATTCTGGGGCTGCTGGATGCTCACTTGAAGACGAGGACTTTTCTGGTGGG
CGAACGAGTGACATTGGCTGACATCACAGTTGTCTGCACCCTGTTGTGGCTCTATAAGCAGGTCCTAGAGCCTTCTTTCC
GCCAGGCCTTTCCCAATACCAACCGCTGGTTCCTCACCTGCATTAATCAGCCCCAGTTCCGGGCTGTCTTGGGGGAAGTG
AAGCTGTGTGAGAAGATGGCCCAGTTTGATGCTAAAAAGTTTGCAGAGACCCAGCCTAAAAAAGATACACCACGGAAAGA
GAAGGGTTCACGGGAAGAGAAGCAGAAGCCCCAGGCTGAGCGGAAGGAGGAGAAAAAGGCGGCTGCCCCTGCTCCTGAGG
AGGAGATGGATGAATGTGAGCAGGCGCTGGCTGCTGAGCCCAAGGCCAAGGACCCCTTCGCTCACTTGCCCAAGAGTACC
TTTGTGTTGGATGAATTTAAGCGCAAGTACTCCAATGAGGACACACTCTCTGTGCACTGCCATATTTCTGGGAACACTTT
GAAAGGACGGCTGGTCCCTGTGGTACTCAGAGTATCGCTTCCCTGAAGACTCCCTCAGACCTTCATGAGCTGCATCTCAT
CACTGGAATGTTTCAGCGACTGGACCAGCTGAGGAGATGCCTTCGCCAGTGTCATCCTCTTTGACACAATAGCAGCTCAA
TTCTTTGAAGTCTGGTCTTCCGGAGCAGGAGCTGCCTTCCGCTGAGTCGAATGCAGGTGACTACGAAGTCAAACATGCGA
CTGATCTGCCGGAGGAACCTGAGCCTGGTCAGAGGATACTATTCTCTGGGAGAGGCTTGCT




Most similar to sp|Q4R7H5|EF1G_MACFA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q4R7H5|EF1G_MACFA Elongation factor 1-gamma OS=Macaca fascicularis
            GN=EEF1G PE=2 SV=1
          Length = 437

 Score =  568 bits (1465), Expect = e-161
 Identities = 297/365 (81%), Positives = 300/365 (82%), Gaps = 2/365 (0%)
 Frame = +2

Query: 20   MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 199
            MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA
Sbjct: 1    MAAGTLYTYPENWRAFKALIAAQYSGAQVRVLSAPPHFHFGQTNRTPEFLRKFPAGKVPA 60

Query: 200  FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 379
            FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI
Sbjct: 61   FEGDDGFCVFESNAIAYYVSNEELRGSTPEAAAQVVQWVSFADSDIVPPASTWVFPTLGI 120

Query: 380  MHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 559
            MHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF
Sbjct: 121  MHHNKQATENAKEEVRRILGLLDAHLKTRTFLVGERVTLADITVVCTLLWLYKQVLEPSF 180

Query: 560  RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSXXX 739
            RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGS   
Sbjct: 181  RQAFPNTNRWFLTCINQPQFRAVLGEVKLCEKMAQFDAKKFAETQPKKDTPRKEKGSREE 240

Query: 740  XXXXXXXXXXXXXXXXXXXXXXMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 919
                                  MDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE
Sbjct: 241  KQKPQAERKEEKKAAAPAPEEEMDECEQALAAEPKAKDPFAHLPKSTFVLDEFKRKYSNE 300

Query: 920  DTLSVHC-HISGNTLKGXXXXXXXXXXXXXXXXQTFMSCISSLECFSDWTS-*GDAFASV 1093
            DTLSV   +   +  K                 QTFMSC      F        +AFASV
Sbjct: 301  DTLSVALPYFWEHFDKDGWSLWYSEYRFPEELTQTFMSCNLITGMFQRLDKLRKNAFASV 360

Query: 1094 ILFDT 1108
            ILF T
Sbjct: 361  ILFGT 365